Package edu.ucdenver.ccp.medline.parser

Medline XML format comes in two flavors depending on the source.

See:
          Description

Class Summary
BookDocument  
BookDocument.Book  
BookDocument.Publisher  
BookDocument.Section  
BookDocument.SectionList  
DeleteCitation
IgnoreUnknownFieldXStream NOTE: The code to check to see if a field is valid is too complex.
MedlineCitation The code in this class is complies with the 2012 NLM MedlineCitationSet DTD.
MedlineCitation.Abstract
MedlineCitation.AbstractText
MedlineCitation.AbstractTextConverter  
MedlineCitation.AccessionNumberList
MedlineCitation.Article
MedlineCitation.ArticleDate
MedlineCitation.Author
MedlineCitation.AuthorList
MedlineCitation.Chemical
MedlineCitation.ChemicalList
MedlineCitation.CommentsCorrections
MedlineCitation.CommentsCorrectionsList
MedlineCitation.DataBank
MedlineCitation.DataBankList
MedlineCitation.Date
MedlineCitation.ELocationId
MedlineCitation.ELocationIdConverter  
MedlineCitation.GeneralNote
MedlineCitation.GeneralNoteConverter  
MedlineCitation.GeneSymbolList
MedlineCitation.Grant
MedlineCitation.GrantList
MedlineCitation.Investigator NOTE: NameID in Investigator element is not currently used; reserved for future use.
MedlineCitation.InvestigatorList
MedlineCitation.Issn
MedlineCitation.IssnConverter  
MedlineCitation.Journal
MedlineCitation.JournalIssue  
MedlineCitation.Keyword
MedlineCitation.KeywordConverter  
MedlineCitation.KeywordList
MedlineCitation.MedlineJournalInfo
MedlineCitation.MeshDescriptorName
MedlineCitation.MeshDescriptorNameConverter  
MedlineCitation.MeshHeading
MedlineCitation.MeshHeadingList
MedlineCitation.MeshQualiferNameConverter  
MedlineCitation.MeshQualifierName
MedlineCitation.NameId
MedlineCitation.NameIdConverter  
MedlineCitation.OtherId
MedlineCitation.OtherIdConverter  
MedlineCitation.Pagination NOTE: StartPage and EndPage in the Pagination element are not currently used; are reserved for future use.
MedlineCitation.PersonalNameSubject
MedlineCitation.PersonalNameSubjectList
MedlineCitation.PubDate
MedlineCitation.PublicationTypeList
MedlineCitation.PubMedId
MedlineCitation.PubMedIdConverter  
MedlineCitation.SupplMeshList
MedlineCitation.SupplMeshName
MedlineCitation.SupplMeshNameConverter  
MedlineCitationSet
MedlineXmlDeserializer  
PubmedArticle  
PubmedArticle.ArticleId  
PubmedArticle.ArticleIdList  
PubmedArticle.History  
PubmedArticle.PubmedData  
PubmedArticle.PubMedPubDate  
PubmedArticleBase  
PubmedArticleSet  
PubmedBookArticle  
PubmedXmlDeserializer  
 

Package edu.ucdenver.ccp.medline.parser Description

Medline XML format comes in two flavors depending on the source. Files downloaded from NLM as part of the Medline lease use the following preamble:

 
 
 
  
 
while files downloaded from a PubMed search in the XML format use:
 
 
 
 
 
 
If dealing with the "medline" format - use MedlineXmlDeserializer If dealing with the "pubmed" format - use PubmedXmlDeserializer



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